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1. Querying KnetMiner

  • Multispecies Selector
  • Keyword Search
  • Genome Region Search
  • Gene List Search

2. Search Views

  • Gene View
  • Evidence View
  • Map View
  • Network View

3. Saving to the cloud

  • Sharing a KnetWork
  • Saving a KnetWork

6. KnetMiner Deployment (Advanced)

  • Programmatic Access of Knowledge Graphs
  • Home

4. Exercises

  • Exercise 1: Choosing the right search terms
  • Exercise 2: Exploratory analysis from gene list
  • Exercise 3: Exploring gene knowledge networks
  • Exercise 4: Exploring KnetMiner Map View

5. Use Cases

  • KnetMiner Plant Use Case
  • Cytoscape Tutorial
  • Home
  • Tutorial
  • 6. KnetMiner Deployment (Advanced)
  • Programmatic Access of Knowledge Graphs

Programmatic Access of Knowledge Graphs

KnetMiner data endpoints offer machine-readable access to the same data that we use for the KnetMiner application, this offers the opportunity for a wider use of the data, for instance, to do Excel exports or to run analyses by means of your own Python scripts.

Accessing the endpoints

We have both a SPARQL & NEO4J endpoint available. If you want to learn more, take a look here.

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Updated on February 24, 2023
2023. KnetMiner is a registered trademark. All rights reserved.
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